Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846871.1_cds_XP_016509807.1_22711
CDS Infomation

[gene=LOC107827224] [db_xref=GeneID:107827224] [protein=G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330] [protein_id=XP_016509807.1] [location=join(61414..62695,62817..63112,63253..63463,63711..63948,64040..64190,64300..64578)] [gbkey=CDS]
Sequence

ATGATCACTTGTAATCAAAATCTGCAATATCTTCTTATTAACATTCTTGTTCTTTATGCT
TTCTATTTTGGACTTTGCATAGGAATATGTAACATTACCAGCACTCAATATCTAAGAGAT
CCAGCAACTTTATGGTGTCCTGGTAACATCTTCATGTTGGGATTTTTCAATCCTCAAAAT
AGCTCGTATCGATACGTTGGTATTTGGTATAACTTCTCTGAAACAACTGTAGTTTGGGTG
GCCAATAGAGACAAGCCTTTGAAAGATTCTTCTGGAGTTGTTAAGATATCTGAGGATGGC
AATCTTGTGGTTATGAATGGAGATAAAGAAACTCTTTGGTCATCAAATATTTCCTCAACT
TCACAAATTACAAATTCAACTGCTCAGCTCCAAGGTGGGAATCTTGTTCTACTTGACAAC
TCGAATAATGGTAGCATAATATGGAAAAGTTACCAACATCCTTGTGATACATTCTTGCCC
AAAATGAAAATACCTATTAACTCTACAAAGACAGGAGAGAAAACAGGGTTGAGATCTTGG
AAAAGCCCTTTGGATCCAAGTTTTGGTGACTTTTCAAGTAGCATTACCACGATCCTTCCC
CAGCTTTTTATTTGGAAAGGGAAGTATCCTCACTGGAGAAGTGGTCAGTGGAATGGTCAG
ATATTCATTGGAGTAAAGCATATGCGATCCGTGCATACCGGTGGATACAATGTTGTAGAT
GATGAAGAGGGAACTGTTTATCTTACTGGTCTTGCTGATAGAAAGGAAGCCGTGAGATTC
ACATTGGAGCCGAATGGGAACTTGGTTCAATCAAACTGGGATGAGAATGAGAGGAAATGG
AAGATCCCTTGGTTAGCTATCAACAATGATTGTGATGTCTATGGAACTTGTGGTCCATTT
GGAAGTTGCAATTCATTGGATTCACCAATTTGTTCTTGTGTGAGAGGTTTTGATCCAAAG
AGTAGAGAAGAATGGGAGAAAGGAAATAGGAGTAGTGGTTGTGTGAGGAGGAAACCTTTG
CAATGTGAAGAAAAGAAGAAAACAAGTAAAGAAGATGGATTTGTGAAGATGGGATTCATG
AAAGTGCCTGATTTGGCAGAATGGTTACCACCTAAGATGGAAGATGAATGCAGAAGCCAA
TGCTTGAGAAATTGTTCTTGCCTAGCCTATGCATTTGATGCGGGGATAGGCTGTATGTCA
TGGAGTAGAACCTTGATTGACATTCAGGAATTCCAACGCGCTGGCACATCTCTTTACATC
CGTGTGGCATATTCTGAACTCGATCATCCCAGAAAGATCAGACTAGTTGCAGTTCTAGTG
ATAGTATCTTTTTTTATTGTTTGCGTTGGCATGTTTCTTTGCTGGTTTTGGATATCAAGG
CGAAGAGGTAAAATATGGTTTCAGTTTAAAAGGAACCATCAGTTGGATGGAAAGAAGATC
TCTTTGGAAGAAAATATTACTACCAAAGTTGATTTGGAGGATTTATCAATGTTCAAGTTT
GAAGTGCTTGCAATGTCCACAGACCAGTTTCATGAGAATAATAAGCTTGGACAAGGTGGT
TTTGGTCCGGTATACAAGGGAATATTAGCAGATGGGAAAGAAATAGCAGTCAAGAGGCTT
TCAACTGCCTCAGGACAAGGGATGGAAGAGTTCATGAATGAAGTGTTGGTGATATCTAAA
GTCCAACATAGAAACCTTGTTAGATTATTGGGATGTTGCATAGATAAAGAGGAGAAGATG
TTGATCTATGAGTACTTGCCATATAAAAGCTTGGATGTCTTTCTCTTTGATCCAACACAT
AAAGGAATCTTGGATTTGAGCAAACGCCTCCACATTATCGAAGGGATTGGGCGAGGACTA
CTTTATCTACACAGAGATTCAAGAATAAAGATAATCCACAGAGATCTAAAGCCAAGTAAT
ATTTTGCTAGATAATGATTTCAATCCAAAGATTTCAGACTTTGGCATGGCTAGAATTTTC
AAATGCAACCAAGATCAAGCAGAGACAAAAAAAGTTGCAGGAACCTATGGGTATATGGCC
CCAGAATACGCCATCAAAGGGACATTCTCTGAGAAATCTGATGTTTTTAGCTTTGGAGTG
CTACTGTTGGAAATCATGTGTGGGCAAAAGGTTGCAAGTTTTTGGAATGAGGATATCCCA
TTAAGCCTTCTTGGATATGCATGGGAACTCTGGAAAGAGAATGATATATCAAATTTCATT
GATCCAGTGATATGGGAACCAGACTTTGAAGTGGTGTTAAAGAGATGCATACACATAGGT
TTGTTGTGTGTTCAAGAATTTGCTAGAGACAGGCCAACAATTTCAACTGTTCTTTCCATG
CTTTCCAGTGAAGTTACAAGTTTGCCAGCACCATTACAGCCCGCTTTCGCTAACTTTTTT
GAGGATAATGGAGGTTCTGTAAATTATGTCACTTTGACAAACCTTGACGGCAGATAA

Peptide Sequence

PEP ID

XP_016509807.1
PEP Infomation

PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Nicotiana tabacum]
Sequence

MITCNQNLQYLLINILVLYAFYFGLCIGICNITSTQYLRDPATLWCPGNIFMLGFFNPQN
SSYRYVGIWYNFSETTVVWVANRDKPLKDSSGVVKISEDGNLVVMNGDKETLWSSNISST
SQITNSTAQLQGGNLVLLDNSNNGSIIWKSYQHPCDTFLPKMKIPINSTKTGEKTGLRSW
KSPLDPSFGDFSSSITTILPQLFIWKGKYPHWRSGQWNGQIFIGVKHMRSVHTGGYNVVD
DEEGTVYLTGLADRKEAVRFTLEPNGNLVQSNWDENERKWKIPWLAINNDCDVYGTCGPF
GSCNSLDSPICSCVRGFDPKSREEWEKGNRSSGCVRRKPLQCEEKKKTSKEDGFVKMGFM
KVPDLAEWLPPKMEDECRSQCLRNCSCLAYAFDAGIGCMSWSRTLIDIQEFQRAGTSLYI
RVAYSELDHPRKIRLVAVLVIVSFFIVCVGMFLCWFWISRRRGKIWFQFKRNHQLDGKKI
SLEENITTKVDLEDLSMFKFEVLAMSTDQFHENNKLGQGGFGPVYKGILADGKEIAVKRL
STASGQGMEEFMNEVLVISKVQHRNLVRLLGCCIDKEEKMLIYEYLPYKSLDVFLFDPTH
KGILDLSKRLHIIEGIGRGLLYLHRDSRIKIIHRDLKPSNILLDNDFNPKISDFGMARIF
KCNQDQAETKKVAGTYGYMAPEYAIKGTFSEKSDVFSFGVLLLEIMCGQKVASFWNEDIP
LSLLGYAWELWKENDISNFIDPVIWEPDFEVVLKRCIHIGLLCVQEFARDRPTISTVLSM
LSSEVTSLPAPLQPAFANFFEDNGGSVNYVTLTNLDGR

Transcript Sequence

Gene sequence data has not been registered.